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Cryo-electron microscopy shows the three-dimensional structure of Norwalk virus, a strain of norovirus. Courtesy of Baylor College of MedicineThe family Caliciviridae is composed of small (27 to 40 nm), nonenveloped, icosahedral viruses that possess a linear, positive-sense, single-stranded RNA (ssRNA) genome. The four genera of the family are Norovirus, Sapovirus, Vesivirus, and Lagovirus. The major medical pathogens in the family are the noroviruses and sapoviruses, which cause acute gastroenteritis. Important veterinary pathogens include vesiviruses such as feline calicivirus (FCV), which causes a respiratory disease in cats, and lagoviruses such as rabbit hemorrhagic disease virus (RHDV), which causes an often fatal hemorrhagic disease in rabbits (Green et al., 2007). Noroviruses are the major cause of nonbacterial epidemic gastroenteritis, a disease that usually occurs in family or community-wide outbreaks. Noroviruses and sapoviruses have been associated with gastroenteritis in infants and young children, but the predominant etiologic agent of severe diarrheal illness in this young age group is the 70-nm rotavirus in the family Reoviridae (Green et al., 2007)
For references and expanded information, please refer to the Norovirus and Sapovirus PathInfo documents.
Norovirus
Pathogen and Disease
Norovirus (NV) (formerly called Norwalk-like virus) is a member of the family Caliciviridae and causes acute nonbacterial gastroenteritis in humans worldwide. NV is highly infectious and spreads by ingestion of contaminated food, such as oysters and water. NV also spreads by person-to-person transmission through the fecal-oral route in semiclosed communities, such as hospitals, schools, nursing homes, and cruise ships. These characteristics make NV a major public health concern. Within the last decade molecular analyses of the genome of Norwalk-like viruses (NLVs) have confirmed that this important group of infectious agents belongs to the Caliciviridae family. NLVs have a positive-sense, single-stranded RNA genome of approximately 7700 nucleotides excluding the polyadenylated tail (Clark and Lambden, 2002).
For references and expanded Norovirus information, please refer to the Norovirus PathInfo document.
Sapovirus
Pathogen and Disease
Human sapoviruses (SVs), formerly known as Sapporo-like viruses, are single-stranded positive sense RNA viruses in the family Caliciviridae. Genetically, SV is divided into five genogroups (genogroup I [GI], GII, GIII, GIV, and GV). GI, GII, GIV and GV infect humans while GIII infects porcine species (Chan et al., 2006). The Sapporo virus (SV) was one of the first HuCVs with classical morphology to be characterized as antigenically distinct from NV and to be partially characterized at the sequence level (Green et al., 2000).
For references and expanded Sapovirus information, please refer to the Sapovirus PathInfo document.
Caliciviridae (223 genomes)
Becovirus (proposed genus) (2 genomes)
Lagovirus (36 genomes)
European brown hare syndrome virus EBHSV-GD (1 genome)
Rabbit calicivirus Australia 1 MIC-07 (1 genome)
Rabbit hemorrhagic disease virus (Bahrain) (1 genome)
Rabbit hemorrhagic disease virus (strain FRG) (1 genome)
Rabbit hemorrhagic disease virus CD/China (1 genome)
Rabbit hemorrhagic disease virus Czech strain V351 (1 genome)
Rabbit hemorrhagic disease virus Iowa2000 (1 genome)
Rabbit hemorrhagic disease virus JX/CHA/97 (1 genome)
Rabbit hemorrhagic disease virus Mexico89/MEX (1 genome)
Rabbit hemorrhagic disease virus RHDV (1 genome)
Rabbit hemorrhagic disease virus RHDV-Hokkaido/2002/JPN (1 genome)
Rabbit hemorrhagic disease virus Saudi Arabia (1 genome)
Rabbit hemorrhagic disease virus WHNRH (1 genome)
Rabbit hemorrhagic disease virus strain Ascot, (1 genome)
Rabbit hemorrhagic disease virus strain Dachswald (1 genome)
Rabbit hemorrhagic disease virus strain Eisenhuttenstadt (1 genome)
Rabbit hemorrhagic disease virus strain Erfurt (1 genome)
Rabbit hemorrhagic disease virus strain Frankfurt12 (1 genome)
Rabbit hemorrhagic disease virus strain Frankfurt5 (1 genome)
Rabbit hemorrhagic disease virus strain Hagenow (1 genome)
Rabbit hemorrhagic disease virus strain Hartmannsdorf (1 genome)
Rabbit hemorrhagic disease virus strain Jena (1 genome)
Rabbit hemorrhagic disease virus strain Meiningen (1 genome)
Rabbit hemorrhagic disease virus strain NZ54 (1 genome)
Rabbit hemorrhagic disease virus strain NZ61 (1 genome)
Rabbit hemorrhagic disease virus strain Rossi (1 genome)
Rabbit hemorrhagic disease virus strain Triptis (1 genome)
Rabbit hemorrhagic disease virus strain Wika (1 genome)
Rabbit hemorrhagic disease virus-AST89 (1 genome)
Rabbit hemorrhagic disease virus-BS89 (1 genome)
Rabbit hemorrhagic disease virus-IN-05 (1 genome)
Rabbit hemorrhagic disease virus-Italy-90 (1 genome)
Rabbit hemorrhagic disease virus-Korea-90 (1 genome)
Rabbit hemorrhagic disease virus-NY-01 (1 genome)
Rabbit hemorrhagic disease virus-SD (1 genome)
Rabbit hemorrhagic disease virus-UT-01 (1 genome)
Norovirus (104 genomes)
GI (5 genomes)
GI_1 (1 genome)
GI_2 (0 genome)
GI_3 (0 genome)
GI_4 (1 genome)
GI_5 (1 genome)
GI_6 (2 genomes)
GI_7 (0 genome)
GI_8 (0 genome)
GII (18 genomes)
GII_1 (1 genome)
GII_10 (0 genome)
GII_11 (0 genome)
GII_12 (2 genomes)
GII_13 (0 genome)
GII_14 (0 genome)
GII_15 (0 genome)
GII_16 (0 genome)
GII_17 (0 genome)
GII_2 (1 genome)
GII_3 (2 genomes)
GII_4 (4 genomes)
GII_5 (0 genome)
GII_6 (4 genomes)
GII_7 (0 genome)
GII_8 (1 genome)
GII_9 (0 genome)
Norovirus Hu/GII/Toronto/SK/2002/CAN (1 genome)
Norovirus Hu/GII/Toronto/SK/2005/CAN (1 genome)
Norovirus Hu/Texas/TCH04-577/2004/US (1 genome)
GIII (3 genomes)
GIV (0 genome)
GV (1 genome)
Human calicivirus Hu/NLV/Oxford/B5S22/2003/UK (1 genome)
Human calicivirus NLV/GII/Langen1061/2002/DE (1 genome)
Human calicivirus strain Mc37 (1 genome)
Murine norovirus (3 genomes)
Murine norovirus 1 clone CW10 (1 genome)
Murine norovirus 1 clone CW11 (1 genome)
Murine norovirus 1 clone CW2 (1 genome)
Murine norovirus 1 clone CW4 (1 genome)
Murine norovirus 1 clone CW5 (1 genome)
Murine norovirus 1 clone CW6 (1 genome)
Murine norovirus 1 clone CW7 (1 genome)
Murine norovirus 1 clone CW8 (1 genome)
Murine norovirus 1 clone CW9 (1 genome)
Murine norovirus 2 (1 genome)
Murine norovirus 3 (1 genome)
Murine norovirus 3 strain K4 (1 genome)
Murine norovirus 4 (1 genome)
Murine norovirus 4 strain S18 (1 genome)
Murine norovirus 5 (1 genome)
Murine norovirus 6 (1 genome)
Murine norovirus GV/CR1/2005/USA (1 genome)
Murine norovirus GV/CR10/2005/USA (1 genome)
Murine norovirus GV/CR11/2005/USA (1 genome)
Murine norovirus GV/CR13/2005/USA (1 genome)
Murine norovirus GV/CR15/2005/USA (1 genome)
Murine norovirus GV/CR17/2005/USA (1 genome)
Murine norovirus GV/CR18/2005/DEU (1 genome)
Murine norovirus GV/CR3/2005/USA (1 genome)
Murine norovirus GV/CR4/2005/USA (1 genome)
Murine norovirus GV/CR5/2005/USA (1 genome)
Murine norovirus GV/CR6/2005/USA (1 genome)
Murine norovirus GV/CR7/2005/USA (1 genome)
Murine norovirus GV/WU11/2005/USA (1 genome)
Murine norovirus GV/WU12/2005/USA (1 genome)
Murine norovirus GV/WU20/2005/USA (1 genome)
Murine norovirus GV/WU21/2005/USA (1 genome)
Murine norovirus GV/WU22/2005/USA (1 genome)
Murine norovirus GV/WU23/2005/USA (1 genome)
Murine norovirus GV/WU24/2005/USA (1 genome)
Murine norovirus GV/WU25/2005/USA (1 genome)
Murine norovirus GV/WU26/2005/USA (1 genome)
Murine norovirus MNV-1 (1 genome)
Murine norovirus MNV-1.CW3 (1 genome)
Murine norovirus strain: S7-P2 (1 genome)
Murine norovirus strain: S7-PP3 (1 genome)
Norovirus Hu/Chiba/04-1050/2005/JP (1 genome)
Norovirus Hu/Ehime/05-30/2005/JP (1 genome)
Norovirus Hu/GI/Otofuke/1979/JP (1 genome)
Norovirus Hu/GII.4/MD-2004/2004/US (1 genome)
Norovirus Hu/GII/Carlow/2002/Ire (1 genome)
Norovirus Hu/GII/Leverkusen267/2005/DE (1 genome)
Norovirus Hu/Guangzhou/NVgz01/CHN (1 genome)
Norovirus Hu/Houston/TCH186/2002/US (1 genome)
Norovirus Hu/MK04/2004/JP (1 genome)
Norovirus Hu/NLV/Dresden174/pUS-NorII/1997/GE (1 genome)
Norovirus Hu/NLV/GII/Neustrelitz260/2000/DE (1 genome)
Norovirus Hu/NLV/Oxford/B2S16/2002/UK (1 genome)
Norovirus Hu/NLV/Oxford/B4S1/2002/UK (1 genome)
Norovirus Hu/NLV/Oxford/B4S2/2002/UK (1 genome)
Norovirus Hu/NLV/Oxford/B4S4/2002/UK (1 genome)
Norovirus Hu/NLV/Oxford/B4S5/2002/UK (1 genome)
Norovirus Hu/NLV/Oxford/B4S6/2002/UK (1 genome)
Norovirus Hu/NLV/Oxford/B4S7/2002/UK (1 genome)
Norovirus Hu/OsakaNI/2004/JP (1 genome)
Norovirus Hu/Sakai/04-179/2005/JP (1 genome)
Norovirus genogroup 2 Hu/NoV/CS-G12002/USA (1 genome)
Norovirus genogroup 2 Hu/NoV/Farmington Hills/2002/USA (1 genome)
Norovirus mouse/Hannover1/2007/DEU (1 genome)
Norwalk virus Vietnam 026 (1 genome)
Norwalk-like virus (5 genomes)
Southampton virus (1 genome)
Sapovirus (19 genomes)
Human calicivirus SLV/Bristol/98/UK (1 genome)
Porcine enteric sapovirus (1 genome)
Porcine enteric sapovirus K7/JP (1 genome)
Porcine enteric sapovirus LL14/USA (1 genome)
Sapovirus C12 (1 genome)
Sapovirus Ehime1107/2002/JP (1 genome)
Sapovirus Hu/Angelholm/SW278/2004/SE (1 genome)
Sapovirus Hu/Angelholm/SW314/2004/SE (1 genome)
Sapovirus Hu/Dresden/pJG-Sap01/DE (1 genome)
Sapovirus Hu/Ehime1596/1999/JP (1 genome)
Sapovirus Hu/Ehime475/2004/JP (1 genome)
Sapovirus Hu/Ehime643/March 2000/JP (1 genome)
Sapovirus Mc10 (1 genome)
Sapovirus Mc2 (1 genome)
Sapovirus NongKhai-24/Thailand (1 genome)
Sapovirus SaKaeo-15/Thailand (1 genome)
Sapporo virus Hu/Dresden/pJG-Sap01/DE (1 genome)
Sapporo virus(Hu/SV/Chiba/000671/1999/JP) (1 genome)
Sapporo virus-Manchester Manchester (1 genome)
Vesivirus (19 genomes)
Feline calicivirus (2 genomes)
Feline calicivirus F4 (1 genome)
Feline calicivirus F65 (1 genome)
Feline calicivirus FCV/DD/2006/GE (1 genome)
Feline calicivirus FCV2024 (1 genome)
Feline calicivirus USDA (1 genome)
Feline calicivirus UTCVM-H1 (1 genome)
Feline calicivirus UTCVM-H2 (1 genome)
Feline calicivirus UTCVM-NH1 (1 genome)
Feline calicivirus UTCVM-NH2 (1 genome)
Feline calicivirus UTCVM-NH3 (1 genome)
Feline calicivirus Urbana (1 genome)
Rabbit vesivirus (1 genome)
San Miguel sea lion virus serotype 1 (1 genome)
Steller sea lion vesivirus V1415 (1 genome)
Steller sea lion vesivirus V810 (1 genome)
VESV-like calicivirus Pan-1 (1 genome)
Vesicular exanthema of swine virus (1 genome)
Unclassified (43 genomes)
- Walrus calicivirus
- Newbury agent 1
- Calicivirus isolate 2117
- Canine calicivirus
- Tulane virus
- Norovirus Hu/GII-4/Kumamoto1/2006/JP
- Norovirus Hu/GII-4/Sakai4/2006/JP
- Norovirus Hu/GII-4/Kumamoto2/2006/JP
- Norovirus Hu/GII-4/Sakai3/2006/JP
- Norovirus Hu/GII-4/Kumamoto3/2006/JP
- Norovirus Hu/GII-4/Akita2/2006/JP
- Norovirus mouse/TW2007/TWN
- Norovirus Hu/GII-4/Sakai2/2006/JP
- Norovirus Hu/GII-4/Ehime5/2006/JP
- Norovirus Hu/GII-4/Aomori5/2006/JP
- Norovirus Hu/GII-4/Akita1/2006/JP
- Norovirus Hu/GII-4/Ehime2/2006/JP
- Norovirus Hu/GII-4/Aomori4/2006/JP
- Norovirus Hu/GII-4/Kumamoto4/2006/JP
- Norovirus Hu/GII-4/Hokkaido5/2006/JP
- Norovirus Hu/GII-4/Aomori1/2006/JP
- Norovirus Hu/GII-4/Aichi4/2006/JP
- Norovirus Hu/GII-4/Hokkaido3/2006/JP
- Norovirus Hu/GII-4/Saga1/2006/JP
- Norovirus Hu/GII-4/Akita5/2006/JP
- Norovirus Hu/GII-4/Toyama1/2006/JP
- Norovirus Hu/GII-4/Hokkaido4/2006/JP
- Norovirus Hu/GII-4/Kumamoto5/2006/JP
- Norovirus Hu/GII-4/Ehime1/2006/JP
- Norovirus Hu/GII-4/Aichi3/2006/JP
- Norovirus Hu/GII-4/Hokkaido2/2006/JP
- Norovirus mouse/TW2006/TWN
- Norovirus Hu/GII-4/Akita4/2006/JP
- Norovirus Hu/GII-4/Miyagi5/2006/JP
- Norovirus Hu/GII-4/Saga4/2006/JP
- Norovirus Hu/GII-4/Hiroshima2/2006/JP
- Norovirus Hu/GII-4/Toyama5/2006/JP
- Norovirus Hu/GII-4/Miyagi4/2006/JP
- Norovirus Hu/GII-4/Saga5/2006/JP
- Norovirus Hu/GII-4/Hiroshima1/2006/JP
- Norovirus Hu/GII-4/Hokkaido1/2006/JP
- Norovirus Hu/GII-4/Toyama4/2006/JP
- Norovirus Hu/GII-4/Miyagi2/2006/JP
- Walrus calicivirus
Orthologs
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